Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1540

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1540
Name
Replicon chromosome
Genomic location 1873239 - 1875698 (+ strand)

Cross-References

RefSeq YP_004352741.1
GI 330808279
Entrez 10470455
INSDC AEA67737.1
NCBI Locus Tag PSEBR_a1540
UniParc UPI000204136D
UniProtKB Acc F2KEA1
UniProtKB ID F2KEA1_PSEBN
UniRef100 UniRef100_A0A0D0S9Z7
UniRef50 UniRef50_D7I2P9
UniRef90 UniRef90_G8Q1Q4

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -14.07
Kyte-Doolittle Hydrophobicity Value 0.021
Molecular Weight (kDa) 90.7
Isoelectric Point (pI) 6.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 473 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000828 (485 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1540

Human Homologs

References

No references are associated with this feature.