Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2202

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a2202
Name
Replicon chromosome
Genomic location 2722700 - 2723605 (+ strand)

Cross-References

RefSeq YP_004353478.1
GI 330809016
Entrez 10471196
INSDC AEA68474.1
NCBI Locus Tag PSEBR_a2202
UniParc UPI0002041A36
UniProtKB Acc F2KGL5
UniProtKB ID F2KGL5_PSEBN
UniRef100 UniRef100_A0A0D0RZY9
UniRef50 UniRef50_G8QAM6
UniRef90 UniRef90_G8QAM6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -0.39
Kyte-Doolittle Hydrophobicity Value -0.009
Molecular Weight (kDa) 33.4
Isoelectric Point (pI) 6.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 415 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022345 (31 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a2202

Human Homologs

References

No references are associated with this feature.