Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a3970
Name
Replicon chromosome
Genomic location 4881132 - 4881827 (- strand)

Cross-References

RefSeq YP_004355369.1
GI 330810907
Entrez 10473105
INSDC AEA70365.1
NCBI Locus Tag PSEBR_a3970
UniParc UPI0002040CF6
UniProtKB Acc F2KJY9
UniProtKB ID F2KJY9_PSEBN
UniRef100 UniRef100_A0A0D0SV35
UniRef50 UniRef50_D7I6K8
UniRef90 UniRef90_G8Q039

Product

Feature Type CDS
Coding Frame 1
Product Name
hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -9.86
Kyte-Doolittle Hydrophobicity Value 0.090
Molecular Weight (kDa) 25.3
Isoelectric Point (pI) 4.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000546 (754 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a3970
Search term: hydrolase

Human Homologs

Ensembl 110, assembly GRCh38.p14
pseudouridine 5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:16818]
E-value: 3.0e-52
Percent Identity: 45.5

References

No references are associated with this feature.