Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4270
Name
Replicon chromosome
Genomic location 5195700 - 5196524 (- strand)

Cross-References

RefSeq YP_004355683.1
GI 330811221
Entrez 10473428
INSDC AEA70679.1
NCBI Locus Tag PSEBR_a4270
UniParc UPI0002041839
UniProtKB Acc F2KKM3
UniProtKB ID F2KKM3_PSEBN
UniRef100 UniRef100_A0A0D0S0W5
UniRef50 UniRef50_Q885Z7
UniRef90 UniRef90_Q885Z7

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA 2-thiocytidine biosynthesis protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.02
Kyte-Doolittle Hydrophobicity Value -0.304
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 7.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001150 (540 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4270

Human Homologs

References

No references are associated with this feature.