Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4275
Name
Replicon chromosome
Genomic location 5201364 - 5202362 (+ strand)

Cross-References

RefSeq YP_004355688.1
GI 330811226
Entrez 10473433
INSDC AEA70684.1
NCBI Locus Tag PSEBR_a4275
UniParc UPI000204183E
UniProtKB Acc F2KKM8
UniProtKB ID F2KKM8_PSEBN
UniRef100 UniRef100_I4K129
UniRef50 UniRef50_Q4K877
UniRef90 UniRef90_G8Q5P0

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.49
Kyte-Doolittle Hydrophobicity Value -0.272
Molecular Weight (kDa) 37.8
Isoelectric Point (pI) 7.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 218 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001140 (924 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4275

Human Homologs

References

No references are associated with this feature.