Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4310
Name
Replicon chromosome
Genomic location 5249237 - 5251858 (- strand)

Cross-References

RefSeq YP_004355722.1
GI 330811260
Entrez 10473471
INSDC AEA70718.1
NCBI Locus Tag PSEBR_a4310
UniParc UPI000204197C
UniProtKB Acc F2KC65
UniProtKB ID F2KC65_PSEBN
UniRef100 UniRef100_A0A0D0SZ82
UniRef50 UniRef50_Q6D1T0
UniRef90 UniRef90_Q4ZQI4

Product

Feature Type CDS
Coding Frame 1
Product Name
alanine--tRNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) -19.89
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 94.5
Isoelectric Point (pI) 5.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000870 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4310

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:20]
E-value: 2.9e-132
Percent Identity: 35.8

References

No references are associated with this feature.