Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4909

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a4909
Name
Replicon chromosome
Genomic location 5944238 - 5944909 (- strand)

Cross-References

RefSeq YP_004356335.1
GI 330811873
Entrez 10474096
INSDC AEA71331.1
NCBI Locus Tag PSEBR_a4909
UniParc UPI0002041C4A
UniProtKB Acc F2K5P2
UniProtKB ID F2K5P2_PSEBN
UniRef100 UniRef100_A0A0D0SZ45
UniRef50 UniRef50_Q4K5N1
UniRef90 UniRef90_G8PX08

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.41
Kyte-Doolittle Hydrophobicity Value -0.240
Molecular Weight (kDa) 25623.0
Isoelectric Point (pI) 6.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a4909

Human Homologs

References

No references are associated with this feature.