Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5104

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5104
Name
Replicon chromosome
Genomic location 6175194 - 6176516 (+ strand)

Cross-References

RefSeq YP_004356557.1
GI 330812095
Entrez 10474327
INSDC AEA71553.1
NCBI Locus Tag PSEBR_a5104
UniParc UPI0002040EB1
UniProtKB Acc F2KM10
UniProtKB ID F2KM10_PSEBN
UniRef100 UniRef100_F2KM10
UniRef50 UniRef50_A0A0B7DGZ2
UniRef90 UniRef90_A0A0D0SVR6

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase
Synonyms
Evidence for Translation
Charge (pH 7) 10.89
Kyte-Doolittle Hydrophobicity Value -0.501
Molecular Weight (kDa) 47774.5
Isoelectric Point (pI) 9.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000646 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5104
Search term: peptidase

Human Homologs

References

No references are associated with this feature.