Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5112

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5112
Name
Replicon	chromosome
Genomic location	6182736 - 6183074 (+ strand)

Cross-References

RefSeq	YP_004356565.1
GI	330812103
Entrez	10474335
INSDC	AEA71561.1
NCBI Locus Tag	PSEBR_a5112
UniParc	UPI0002040EB9
UniProtKB Acc	F2KM18
UniProtKB ID	F2KM18_PSEBN
UniRef100	UniRef100_A0A0D0R4M8
UniRef50	UniRef50_G8Q094
UniRef90	UniRef90_G8Q094

Product

Feature Type	CDS
Coding Frame	1
Product Name	HIT family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.63
Kyte-Doolittle Hydrophobicity Value	-0.081
Molecular Weight (kDa)	12.7
Isoelectric Point (pI)	6.22

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 636 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000635 (884 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5112 Search term: HIT family protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000304229 histidine triad nucleotide binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4912] E-value: 5.6e-36 Percent Identity: 57.7

References