Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5128

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5128
Name
Replicon chromosome
Genomic location 6198698 - 6199822 (- strand)

Cross-References

RefSeq YP_004356583.1
GI 330812121
Entrez 10474353
INSDC AEA71579.1
NCBI Locus Tag PSEBR_a5128
UniParc UPI0002040ECB
UniProtKB Acc F2KM36
UniProtKB ID F2KM36_PSEBN
UniRef100 UniRef100_A0A0D0RWB6
UniRef50 UniRef50_B9KZG1
UniRef90 UniRef90_G8Q0B0

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.67
Kyte-Doolittle Hydrophobicity Value -0.161
Molecular Weight (kDa) 41.2
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000586 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5128

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 4.5e-21
Percent Identity: 31.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 4.5e-21
Percent Identity: 31.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 4.5e-21
Percent Identity: 31.1

References

No references are associated with this feature.