Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5160

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5160
Name
Replicon chromosome
Genomic location 6250980 - 6251582 (+ strand)

Cross-References

RefSeq YP_004356634.1
GI 330812172
Entrez 10474405
INSDC AEA71630.1
NCBI Locus Tag PSEBR_a5160
UniParc UPI00020411A5
UniProtKB Acc F2KM87
UniProtKB ID F2KM87_PSEBN
UniRef100 UniRef100_A0A0D0S2Q8
UniRef50 UniRef50_Q4K5M0
UniRef90 UniRef90_G8Q1A8

Product

Feature Type CDS
Coding Frame 1
Product Name
protocatechuate 34-dioxygenase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -8.11
Kyte-Doolittle Hydrophobicity Value -0.266
Molecular Weight (kDa) 22.2
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 105 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000152 (447 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5160

Human Homologs

References

No references are associated with this feature.