Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5340

Gene Feature Overview

Strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421 GCF_000194805.1|latest
Locus Tag	PSEBR_a5340
Name
Replicon	chromosome
Genomic location	6460238 - 6461728 (+ strand)

Cross-References

RefSeq	YP_004356846.1
GI	330812384
Entrez	10474617
INSDC	AEA71842.1
NCBI Locus Tag	PSEBR_a5340
UniParc	UPI0002041886
UniProtKB Acc	F2K6B5
UniProtKB ID	F2K6B5_PSEBN
UniRef100	UniRef100_A0A0D0T836
UniRef50	UniRef50_Q4K4B6
UniRef90	UniRef90_J2E6L4

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.30
Kyte-Doolittle Hydrophobicity Value	-0.189
Molecular Weight (kDa)	52.8
Isoelectric Point (pI)	6.20

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3GWB	HYDROLASE	03/31/09	Crystal structure of peptidase M16 inactive domain from Pseudomonas fluorescens. Northeast Structural Genomics target PlR293L	Pseudomonas fluorescens	1.9	X-RAY DIFFRACTION	90.4

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000362 (532 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEBR_a5340

Human Homologs

References