Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5342

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5342
Name
Replicon chromosome
Genomic location 6462368 - 6463369 (+ strand)

Cross-References

RefSeq YP_004356848.1
GI 330812386
Entrez 10474619
INSDC AEA71844.1
NCBI Locus Tag PSEBR_a5342
UniParc UPI00020419A3
UniProtKB Acc F2K6B7
UniProtKB ID F2K6B7_PSEBN
UniRef100 UniRef100_A0A0D0T3J2
UniRef50 UniRef50_G8Q3N8
UniRef90 UniRef90_G8Q3N8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.78
Kyte-Doolittle Hydrophobicity Value -0.306
Molecular Weight (kDa) 36886.2
Isoelectric Point (pI) 7.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 187 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000359 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5342

Human Homologs

Ensembl 110, assembly GRCh38.p14
abhydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17553]
E-value: 1.0e-32
Percent Identity: 28.5

References

No references are associated with this feature.