Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5344

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5344
Name
Replicon chromosome
Genomic location 6464395 - 6465054 (- strand)

Cross-References

RefSeq YP_004356850.1
GI 330812388
Entrez 10474621
INSDC AEA71846.1
NCBI Locus Tag PSEBR_a5344
UniParc UPI00020419A5
UniProtKB Acc F2K6B9
UniProtKB ID F2K6B9_PSEBN
UniRef100 UniRef100_I4JZY8
UniRef50 UniRef50_Q4K4B1
UniRef90 UniRef90_I4JZY8

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.35
Kyte-Doolittle Hydrophobicity Value -0.247
Molecular Weight (kDa) 25422.7
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 105 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000358 (518 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5344

Human Homologs

References

No references are associated with this feature.