Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5546

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5546
Name
Replicon chromosome
Genomic location 6684290 - 6686017 (- strand)

Cross-References

RefSeq YP_004357080.1
GI 330812618
Entrez 10474851
INSDC AEA72076.1
NCBI Locus Tag PSEBR_a5546
UniParc UPI0002040A97
UniProtKB Acc F2K6Z9
UniProtKB ID F2K6Z9_PSEBN
UniRef100 UniRef100_A0A0D0T686
UniRef50 UniRef50_Q4K3Q0
UniRef90 UniRef90_G8Q704

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.31
Kyte-Doolittle Hydrophobicity Value -0.296
Molecular Weight (kDa) 62.8
Isoelectric Point (pI) 5.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 73 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000070 (413 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5546

Human Homologs

References

No references are associated with this feature.