Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5558

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5558
Name
Replicon chromosome
Genomic location 6702213 - 6702719 (+ strand)

Cross-References

RefSeq YP_004357092.1
GI 330812630
Entrez 10474863
INSDC AEA72088.1
NCBI Locus Tag PSEBR_a5558
UniParc UPI0002040BDB
UniProtKB Acc F2K711
UniProtKB ID F2K711_PSEBN
UniRef100 UniRef100_A0A0D0T1G1
UniRef50 UniRef50_Q4K3N8
UniRef90 UniRef90_Q4K3N8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.76
Kyte-Doolittle Hydrophobicity Value -0.223
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4UQZ PROTEIN TRANSPORT 06/25/14 Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes PSEUDOMONAS AERUGINOSA PAO1 1.599 X-RAY DIFFRACTION 93.9
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 95.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1260 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5558

References

No references are associated with this feature.