Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5558

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5558
Name
Replicon chromosome
Genomic location 6702213 - 6702719 (+ strand)

Cross-References

RefSeq YP_004357092.1
GI 330812630
Entrez 10474863
INSDC AEA72088.1
NCBI Locus Tag PSEBR_a5558
UniParc UPI0002040BDB
UniProtKB Acc F2K711
UniProtKB ID F2K711_PSEBN
UniRef100 UniRef100_A0A0D0T1G1
UniRef50 UniRef50_Q4K3N8
UniRef90 UniRef90_Q4K3N8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.76
Kyte-Doolittle Hydrophobicity Value -0.223
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 95.4
4UQZ PROTEIN TRANSPORT 06/25/14 Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes PSEUDOMONAS AERUGINOSA PAO1 1.599 X-RAY DIFFRACTION 93.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 107 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1260 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5558

References

No references are associated with this feature.