Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5559

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5559
Name
Replicon chromosome
Genomic location 6702716 - 6704218 (+ strand)

Cross-References

RefSeq YP_004357093.1
GI 330812631
Entrez 10474864
INSDC AEA72089.1
NCBI Locus Tag PSEBR_a5559
UniParc UPI0002040BDC
UniProtKB Acc F2K712
UniProtKB ID F2K712_PSEBN
UniRef100 UniRef100_F2K712
UniRef50 UniRef50_Q4K3N7
UniRef90 UniRef90_Q4K3N7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -14.27
Kyte-Doolittle Hydrophobicity Value -0.426
Molecular Weight (kDa) 55884.4
Isoelectric Point (pI) 5.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 93.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 111 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1261 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5559

References

No references are associated with this feature.