Pseudomonas sp. UW4, PputUW4_00004 (gyrB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00004
Name
gyrB
Replicon chromosome
Genomic location 4181 - 6598 (+ strand)

Cross-References

RefSeq YP_007027018.1
GI 426406919
EC Number 5.99.1.3
Entrez 14053709
INSDC AFY17213.1
NCBI Locus Tag PputUW4_00004
UniParc UPI0002701A76
UniProtKB Acc K9NDJ9
UniProtKB ID K9NDJ9_9PSED
UniRef100 UniRef100_K9NDJ9
UniRef50 UniRef50_P13364
UniRef90 UniRef90_Q4KKS7

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -18.48
Kyte-Doolittle Hydrophobicity Value -0.400
Molecular Weight (kDa) 90.3
Isoelectric Point (pI) 5.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000004 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00004
Search term: gyrB

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value: 5.1e-30
Percent Identity: 24.6

References

No references are associated with this feature.