Pseudomonas sp. UW4, PputUW4_00025 (betC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00025
Name
betC
Replicon chromosome
Genomic location 26498 - 28012 (- strand)

Cross-References

RefSeq YP_007027039.1
GI 426406940
EC Number 3.1.6.6
Entrez 14053724
NCBI Locus Tag PputUW4_00025

Product

Feature Type CDS
Coding Frame 1
Product Name
choline-sulfatase
Synonyms
Evidence for Translation
Charge (pH 7) -16.90
Kyte-Doolittle Hydrophobicity Value -0.384
Molecular Weight (kDa) 57103.1
Isoelectric Point (pI) 5.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 284 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000031 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00025
Search term: betC
Search term: choline-sulfatase

Human Homologs

Ensembl 110, assembly GRCh38.p14
iduronate 2-sulfatase [Source:HGNC Symbol;Acc:HGNC:5389]
E-value: 5.2e-33
Percent Identity: 29.6

References

No references are associated with this feature.