Pseudomonas sp. UW4, PputUW4_00094 (trpI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00094
Name
trpI
Replicon chromosome
Genomic location 94650 - 95543 (- strand)

Cross-References

RefSeq YP_007027108.1
GI 426407009
Entrez 14053774
NCBI Locus Tag PputUW4_00094

Product

Feature Type CDS
Coding Frame 1
Product Name
HTH-type transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.40
Kyte-Doolittle Hydrophobicity Value -0.167
Molecular Weight (kDa) 32656.0
Isoelectric Point (pI) 6.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 405 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000037 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00094
Search term: trpI

Human Homologs

References

No references are associated with this feature.