Pseudomonas sp. UW4, PputUW4_00147 (gabT1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_00147
Name
gabT1
Replicon chromosome
Genomic location 165674 - 166951 (+ strand)

Cross-References

RefSeq YP_007027160.1
GI 426407061
EC Number 2.6.1.19
Entrez 14053818
INSDC AFY17355.1
NCBI Locus Tag PputUW4_00147
UniParc UPI0002702BBE
UniProtKB Acc K9NDR2
UniProtKB ID K9NDR2_9PSED
UniRef100 UniRef100_K9NDR2
UniRef50 UniRef50_P22256
UniRef90 UniRef90_G8PZ77

Product

Feature Type CDS
Coding Frame 1
Product Name
4-aminobutyrate transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -4.07
Kyte-Doolittle Hydrophobicity Value 0.218
Molecular Weight (kDa) 44.8
Isoelectric Point (pI) 6.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000263 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_00147
Search term: gabT1

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 3.1e-42
Percent Identity: 30.2

References

No references are associated with this feature.