Pseudomonas sp. UW4, PputUW4_03659

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_03659
Name
Replicon chromosome
Genomic location 4252199 - 4252918 (- strand)

Cross-References

RefSeq YP_007030656.1
GI 426410557
Entrez 14054615
INSDC AFY20851.1
NCBI Locus Tag PputUW4_03659
UniParc UPI0002700A31
UniProtKB Acc K9NLB4
UniProtKB ID K9NLB4_9PSED
UniRef100 UniRef100_K9NLB4
UniRef50 UniRef50_G8Q028
UniRef90 UniRef90_G8Q028

Product

Feature Type CDS
Coding Frame 1
Product Name
GntR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.65
Kyte-Doolittle Hydrophobicity Value -0.585
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7XP0 SIGNALING PROTEIN 05/02/22 Crystal structure of PmiR from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2.61 X-RAY DIFFRACTION 90.1
7XP1 SIGNALING PROTEIN 05/02/22 Crystal structure of PmiR from Pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2.5 X-RAY DIFFRACTION 90.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000770 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_03659

Human Homologs

References

No references are associated with this feature.