Pseudomonas sp. UW4, PputUW4_05088 (rsmE2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05088
Name
rsmE2
Replicon chromosome
Genomic location 5810796 - 5811515 (+ strand)

Cross-References

RefSeq YP_007032083.1
GI 426411984
EC Number 2.1.1.193
Entrez 14055430
NCBI Locus Tag PputUW4_05088

Product

Feature Type CDS
Coding Frame 1
Product Name
16S ribosomal RNA methyltransferase RsmE
Synonyms
Evidence for Translation
Charge (pH 7) -2.16
Kyte-Doolittle Hydrophobicity Value -0.155
Molecular Weight (kDa) 26504.2
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 537 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000410 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05088
Search term: rsmE2

Human Homologs

References

No references are associated with this feature.