Pseudomonas sp. UW4, PputUW4_05385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_05385
Name
Replicon chromosome
Genomic location 6117883 - 6118845 (+ strand)

Cross-References

RefSeq YP_007032379.1
GI 426412280
Entrez 14055469
INSDC AFY22574.1
NCBI Locus Tag PputUW4_05385
UniParc UPI00027022CF
UniProtKB Acc K9NS71
UniProtKB ID K9NS71_9PSED
UniRef100 UniRef100_K9NS71
UniRef50 UniRef50_Q4K3G6
UniRef90 UniRef90_Q4K3G6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.54
Kyte-Doolittle Hydrophobicity Value -0.145
Molecular Weight (kDa) 36.3
Isoelectric Point (pI) 7.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 545 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004987 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_05385

Human Homologs

References

No references are associated with this feature.