Pseudomonas protegens Pf-5, PFL_0012 (gmhB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0012
Name
gmhB
Replicon chromosome
Genomic location 14189 - 14722 (- strand)

Cross-References

RefSeq YP_257164.1
GI 70733525
EC Number 3.1.3.-
Entrez 3480612
INSDC AAY95430.1
NCBI Locus Tag PFL_0012
UniParc UPI000054CB6A
UniProtKB Acc Q4KKR9
UniProtKB ID Q4KKR9_PSEF5
UniRef100 UniRef100_Q4KKR9
UniRef50 UniRef50_Q4KKR9
UniRef90 UniRef90_Q4KKR9

Product

Feature Type CDS
Coding Frame 1
Product Name
D,D-heptose 1,7-bisphosphate phosphatase
Synonyms
Evidence for Translation
Charge (pH 7) -5.90
Kyte-Doolittle Hydrophobicity Value 0.047
Molecular Weight (kDa) 18.9
Isoelectric Point (pI) 5.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 362 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000006 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0012
Search term: gmhB

Human Homologs

References

No references are associated with this feature.