Pseudomonas protegens Pf-5, PFL_0015 (tag_2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0015
Name
tag_2
Replicon chromosome
Genomic location 17826 - 18389 (+ strand)

Cross-References

RefSeq YP_257167.1
GI 70733528
EC Number 3.2.2.20
Entrez 3480615
INSDC AAY95433.1
NCBI Locus Tag PFL_0015
UniParc UPI000054CB6D
UniProtKB Acc Q4KKR6
UniProtKB ID Q4KKR6_PSEF5
UniRef100 UniRef100_Q4KKR6
UniRef50 UniRef50_Q4KKR6
UniRef90 UniRef90_Q4KKR6

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-3-methyladenine glycosylase I
Synonyms
Evidence for Translation
Charge (pH 7) -5.16
Kyte-Doolittle Hydrophobicity Value -0.156
Molecular Weight (kDa) 21.4
Isoelectric Point (pI) 5.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 355 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000010 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0015
Search term: tag_2

Human Homologs

References

No references are associated with this feature.