Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_0020
|
Name |
rsmB
|
Replicon | chromosome |
Genomic location | 21641 - 22966 (- strand) |
RefSeq | YP_257172.1 |
GI | 70733533 |
EC Number | 2.1.1.- |
Entrez | 3480620 |
INSDC | AAY95438.1 |
NCBI Locus Tag | PFL_0020 |
UniParc | UPI000054CB72 |
UniProtKB Acc | Q4KKR1 |
UniProtKB ID | Q4KKR1_PSEF5 |
UniRef100 | UniRef100_Q4KKR1 |
UniRef50 | UniRef50_Q4KKR1 |
UniRef90 | UniRef90_Q4KKR1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
16S rRNA methyltransferase GidB
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 2.18 |
Kyte-Doolittle Hydrophobicity Value | -0.071 |
Molecular Weight (kDa) | 47857.6 |
Isoelectric Point (pI) | 7.52 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000017 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_0020
Search term: rsmB
Search term: 16S rRNA methyltransferase GidB
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
6.4e-27
Percent Identity:
30.1
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
6.4e-27
Percent Identity:
30.1
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
6.4e-27
Percent Identity:
30.1
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
6.4e-27
Percent Identity:
30.1
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
6.4e-27
Percent Identity:
30.1
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
6.4e-27
Percent Identity:
30.1
|