Pseudomonas protegens Pf-5, PFL_0028 (aroE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0028
Name
aroE
Replicon chromosome
Genomic location 29689 - 30510 (+ strand)

Cross-References

RefSeq YP_257180.1
GI 70733541
EC Number 1.1.1.25
Entrez 3480628
INSDC AAY95446.1
NCBI Locus Tag PFL_0028
UniParc UPI000054CB7A
UniProtKB Acc Q4KKQ3
UniProtKB ID Q4KKQ3_PSEF5
UniRef100 UniRef100_Q4KKQ3
UniRef50 UniRef50_A1S1K8
UniRef90 UniRef90_Q4KKQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
shikimate 5-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.37
Kyte-Doolittle Hydrophobicity Value -0.017
Molecular Weight (kDa) 29196.9
Isoelectric Point (pI) 4.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000025 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0028
Search term: aroE

Human Homologs

References

No references are associated with this feature.