Pseudomonas protegens Pf-5, PFL_0029

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0029
Name
Replicon chromosome
Genomic location 30626 - 32194 (- strand)

Cross-References

RefSeq YP_257181.1
GI 70733542
Entrez 3480629
INSDC AAY95447.1
NCBI Locus Tag PFL_0029
UniParc UPI000054CB7B
UniProtKB Acc Q4KKQ2
UniProtKB ID Q4KKQ2_PSEF5
UniRef100 UniRef100_Q4KKQ2
UniRef50 UniRef50_G8PX82
UniRef90 UniRef90_Q4KKQ2

Product

Feature Type CDS
Coding Frame 1
Product Name
SulP family inorganic anion transporter
Synonyms
Evidence for Translation
Charge (pH 7) 7.19
Kyte-Doolittle Hydrophobicity Value 0.651
Molecular Weight (kDa) 56294.7
Isoelectric Point (pI) 8.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 438 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000029 (912 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0029

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 1.4e-41
Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 1.4e-41
Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 1.4e-41
Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14
solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
E-value: 1.4e-41
Percent Identity: 30.6

References

No references are associated with this feature.