Pseudomonas protegens Pf-5, PFL_0031 (betC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0031
Name
betC
Replicon chromosome
Genomic location 33230 - 34744 (- strand)

Cross-References

RefSeq YP_257183.1
GI 70733544
EC Number 3.1.6.6
Entrez 3480631
INSDC AAY95449.1
NCBI Locus Tag PFL_0031
UniParc UPI000054CB7D
UniProtKB Acc Q4KKQ0
UniProtKB ID Q4KKQ0_PSEF5
UniRef100 UniRef100_Q4KKQ0
UniRef50 UniRef50_Q4KKQ0
UniRef90 UniRef90_Q4KKQ0

Product

Feature Type CDS
Coding Frame 1
Product Name
choline-sulfatase
Synonyms
Evidence for Translation
Charge (pH 7) -8.70
Kyte-Doolittle Hydrophobicity Value -0.401
Molecular Weight (kDa) 57232.4
Isoelectric Point (pI) 6.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 276 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000031 (496 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0031
Search term: betC
Search term: choline-sulfatase

Human Homologs

Ensembl 110, assembly GRCh38.p14
iduronate 2-sulfatase [Source:HGNC Symbol;Acc:HGNC:5389]
E-value: 8.1e-34
Percent Identity: 28.2

References

No references are associated with this feature.