Pseudomonas protegens Pf-5, PFL_0032

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0032
Name
Replicon chromosome
Genomic location 34859 - 35809 (+ strand)

Cross-References

RefSeq YP_257184.1
GI 70733545
Entrez 3480632
INSDC AAY95450.1
NCBI Locus Tag PFL_0032
UniParc UPI000054CB7E
UniProtKB Acc Q4KKP9
UniProtKB ID Q4KKP9_PSEF5
UniRef100 UniRef100_Q4KKP9
UniRef50 UniRef50_Q48QH1
UniRef90 UniRef90_Q4KKP9

Product

Feature Type CDS
Coding Frame 1
Product Name
choline sulfate-utilization transcription factor
Synonyms
Evidence for Translation
Charge (pH 7) -4.92
Kyte-Doolittle Hydrophobicity Value 0.045
Molecular Weight (kDa) 35061.8
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 509 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000032 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0032

Human Homologs

References

No references are associated with this feature.