Pseudomonas protegens Pf-5, PFL_0036 (trpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0036
Name
trpA
Replicon chromosome
Genomic location 37501 - 38313 (- strand)

Cross-References

RefSeq YP_257188.1
GI 70733549
EC Number 4.2.1.20
Entrez 3480636
INSDC AAY95454.1
NCBI Locus Tag PFL_0036
UniParc UPI000054CB82
UniProtKB Acc Q4KKP5
UniProtKB ID TRPA_PSEF5
UniRef100 UniRef100_Q4KKP5
UniRef50 UniRef50_P07344
UniRef90 UniRef90_Q4KKP5

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -6.62
Kyte-Doolittle Hydrophobicity Value 0.116
Molecular Weight (kDa) 28427.1
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000035 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0036
Search term: trpA

Human Homologs

References

No references are associated with this feature.