Pseudomonas protegens Pf-5, PFL_0066

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0066
Name
Replicon chromosome
Genomic location 64456 - 65196 (+ strand)

Cross-References

RefSeq YP_257218.2
GI 346642651
Entrez 3480665
INSDC AAY95483.2
NCBI Locus Tag PFL_0066
UniParc UPI000219FE93
UniProtKB Acc Q4KKL5
UniProtKB ID Q4KKL5_PSEF5
UniRef100 UniRef100_Q4KKL5
UniRef50 UniRef50_G8PXA4
UniRef90 UniRef90_Q4KKL5

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.64
Kyte-Doolittle Hydrophobicity Value -0.141
Molecular Weight (kDa) 27592.4
Isoelectric Point (pI) 8.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 144 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000108 (493 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0066

Human Homologs

References

No references are associated with this feature.