Pseudomonas protegens Pf-5, PFL_0067

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0067
Name
Replicon chromosome
Genomic location 65252 - 65752 (+ strand)

Cross-References

RefSeq YP_257219.1
GI 70733579
Entrez 3480666
INSDC AAY95484.1
NCBI Locus Tag PFL_0067
UniParc UPI000054CBA1
UniProtKB Acc Q4KKL4
UniProtKB ID Q4KKL4_PSEF5
UniRef100 UniRef100_Q4KKL4
UniRef50 UniRef50_A0A0A1HQJ4
UniRef90 UniRef90_Q4KKL4

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.89
Kyte-Doolittle Hydrophobicity Value -0.293
Molecular Weight (kDa) 18639.2
Isoelectric Point (pI) 8.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 35 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000109 (493 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0067

Human Homologs

References

No references are associated with this feature.