Pseudomonas protegens Pf-5, PFL_0102

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0102
Name
Replicon chromosome
Genomic location 103170 - 104552 (- strand)

Cross-References

RefSeq YP_257254.1
GI 70733614
EC Number 3.4.24.-
Entrez 3480701
INSDC AAY95519.1
NCBI Locus Tag PFL_0102
UniParc UPI000054CBC4
UniProtKB Acc Q4KKH9
UniProtKB ID Q4KKH9_PSEF5
UniRef100 UniRef100_Q4KKH9
UniRef50 UniRef50_Q4KKH9
UniRef90 UniRef90_Q4KKH9

Product

Feature Type CDS
Coding Frame 1
Product Name
M16 family peptidase
Synonyms
Evidence for Translation
Charge (pH 7) -15.21
Kyte-Doolittle Hydrophobicity Value -0.220
Molecular Weight (kDa) 51483.0
Isoelectric Point (pI) 4.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 386 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005016 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0102

Human Homologs

References

No references are associated with this feature.