Pseudomonas protegens Pf-5, PFL_0227 (exbD2)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0227
Name	exbD2
Replicon	chromosome
Genomic location	264057 - 264458 (+ strand)

Cross-References

RefSeq	YP_257373.1
GI	70733733
Entrez	3480820
INSDC	AAY95638.1
NCBI Locus Tag	PFL_0227
UniParc	UPI000054CC3A
UniProtKB Acc	Q4KK60
UniProtKB ID	Q4KK60_PSEF5
UniRef100	UniRef100_Q4KK60
UniRef50	UniRef50_Q4KK60
UniRef90	UniRef90_Q4KK60

Product

Feature Type	CDS
Coding Frame	1
Product Name	TonB system transport protein ExbD2
Synonyms
Evidence for Translation
Charge (pH 7)	-7.01
Kyte-Doolittle Hydrophobicity Value	0.257
Molecular Weight (kDa)	14.3
Isoelectric Point (pI)	4.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 330 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000198 (492 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0227 Search term: exbD2 Search term: TonB system transport protein ExbD2

Human Homologs

References