Pseudomonas protegens Pf-5, PFL_0236

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0236
Name
Replicon chromosome
Genomic location 272560 - 273654 (+ strand)

Cross-References

RefSeq YP_257382.1
GI 70733742
Entrez 3480829
INSDC AAY95647.1
NCBI Locus Tag PFL_0236
UniParc UPI000054CC43
UniProtKB Acc Q4KK51
UniProtKB ID Q4KK51_PSEF5
UniRef100 UniRef100_Q4KK51
UniRef50 UniRef50_Q4KK51
UniRef90 UniRef90_Q4KK51

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) 1.94
Kyte-Doolittle Hydrophobicity Value -0.010
Molecular Weight (kDa) 38.4
Isoelectric Point (pI) 8.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 408 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000154 (998 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0236

Human Homologs

References

No references are associated with this feature.