Pseudomonas protegens Pf-5, PFL_0942

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0942
Name
Replicon chromosome
Genomic location 1084953 - 1086056 (+ strand)

Cross-References

RefSeq YP_258073.1
GI 70728324
Entrez 3475800
INSDC AAY90229.1
NCBI Locus Tag PFL_0942
UniParc UPI000054CEF4
UniProtKB Acc Q4KI60
UniProtKB ID Q4KI60_PSEF5
UniRef100 UniRef100_Q4KI60
UniRef50 UniRef50_F4C9I9
UniRef90 UniRef90_W6VHZ2

Product

Feature Type CDS
Coding Frame 1
Product Name
FAD/FMN dependent oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value -0.192
Molecular Weight (kDa) 40.3
Isoelectric Point (pI) 5.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 505 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000807 (472 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0942

Human Homologs

References

No references are associated with this feature.