Pseudomonas protegens Pf-5, PFL_0995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0995
Name
Replicon chromosome
Genomic location 1137462 - 1139897 (+ strand)

Cross-References

RefSeq YP_258126.1
GI 70728377
Entrez 3476730
INSDC AAY90282.1
NCBI Locus Tag PFL_0995
UniParc UPI000054CF29
UniProtKB Acc Q4KI07
UniProtKB ID Q4KI07_PSEF5
UniRef100 UniRef100_Q4KI07
UniRef50 UniRef50_Q4KI07
UniRef90 UniRef90_Q4KI07

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent outermembrane receptor
Synonyms
Evidence for Translation
Charge (pH 7) -10.09
Kyte-Doolittle Hydrophobicity Value -0.354
Molecular Weight (kDa) 87993.2
Isoelectric Point (pI) 5.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 297 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000149 (2669 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0995

Human Homologs

References

No references are associated with this feature.