Pseudomonas protegens Pf-5, PFL_1297 (braF)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1297
Name	braF
Replicon	chromosome
Genomic location	1466255 - 1467022 (- strand)

Cross-References

RefSeq	YP_258426.1
GI	70728677
Entrez	3475763
INSDC	AAY90582.1
NCBI Locus Tag	PFL_1297
UniParc	UPI000054D054
UniProtKB Acc	Q4KH57
UniProtKB ID	Q4KH57_PSEF5
UniRef100	UniRef100_Q4KH57
UniRef50	UniRef50_P21629
UniRef90	UniRef90_W6UX59

Product

Feature Type	CDS
Coding Frame	1
Product Name	leucine/isoleucine/valine transporter ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7)	4.38
Kyte-Doolittle Hydrophobicity Value	-0.095
Molecular Weight (kDa)	28.2
Isoelectric Point (pI)	9.07

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001033 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1297 Search term: braF Search term: leucine/isoleucine/valine transporter ATP-binding subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000513710 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 9.2e-18 Percent Identity: 26.9

References