Pseudomonas protegens Pf-5, PFL_1316 (pcaK)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1316
Name	pcaK
Replicon	chromosome
Genomic location	1489887 - 1491233 (+ strand)

Cross-References

RefSeq	YP_258445.2
GI	346642785
Entrez	3478135
INSDC	AAY90601.2
NCBI Locus Tag	PFL_1316
UniParc	UPI000219FEDE
UniProtKB Acc	Q4KH38
UniProtKB ID	Q4KH38_PSEF5
UniRef100	UniRef100_Q4KH38
UniRef50	UniRef50_Q51955
UniRef90	UniRef90_Q51955

Product

Feature Type	CDS
Coding Frame	1
Product Name	4-hydroxybenzoate transporter PcaK
Synonyms
Evidence for Translation
Charge (pH 7)	8.79
Kyte-Doolittle Hydrophobicity Value	0.784
Molecular Weight (kDa)	47.3
Isoelectric Point (pI)	9.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000234 (2404 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1316 Search term: pcaK Search term: 4-hydroxybenzoate transporter PcaK

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000439274 solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963] E-value: 1.6e-09 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000318103 solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963] E-value: 1.6e-09 Percent Identity: 30.6
Ensembl 110, assembly GRCh38.p14	ENSP00000409557 solute carrier family 22 member 1 [Source:HGNC Symbol;Acc:HGNC:10963] E-value: 1.6e-09 Percent Identity: 30.6

References