Pseudomonas protegens Pf-5, PFL_1392

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1392
Name
Replicon chromosome
Genomic location 1573620 - 1573958 (+ strand)

Cross-References

RefSeq YP_258521.1
GI 70728772
Entrez 3475722
INSDC AAY90677.1
NCBI Locus Tag PFL_1392
UniParc UPI000054D0B3
UniProtKB Acc Q4KGW2
UniProtKB ID Q4KGW2_PSEF5
UniRef100 UniRef100_Q4KGW2
UniRef50 UniRef50_Q4KGW2
UniRef90 UniRef90_Q4KGW2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.46
Kyte-Doolittle Hydrophobicity Value -0.681
Molecular Weight (kDa) 12.2
Isoelectric Point (pI) 9.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 92 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG019875 (44 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1392

Human Homologs

References

No references are associated with this feature.