Pseudomonas protegens Pf-5, PFL_1416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1416
Name
Replicon chromosome
Genomic location 1596433 - 1597443 (+ strand)

Cross-References

RefSeq YP_258545.1
GI 70728796
Entrez 3478958
INSDC AAY90701.1
NCBI Locus Tag PFL_1416
UniParc UPI000054D0CB
UniProtKB Acc Q4KGT8
UniProtKB ID PY2CR_PSEF5
UniRef100 UniRef100_Q4KGT8
UniRef50 UniRef50_Q9I492
UniRef90 UniRef90_Q4KGT8

Product

Feature Type CDS
Coding Frame 1
Product Name
malate/L-lactate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -2.78
Kyte-Doolittle Hydrophobicity Value -0.020
Molecular Weight (kDa) 36028.7
Isoelectric Point (pI) 6.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 206 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001204 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1416

Human Homologs

References

No references are associated with this feature.