Pseudomonas protegens Pf-5, PFL_1447 (nadB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1447
Name
nadB
Replicon chromosome
Genomic location 1625968 - 1627584 (- strand)

Cross-References

RefSeq YP_258575.2
GI 346642797
EC Number 1.4.3.16
Entrez 3475795
INSDC AAY90731.2
NCBI Locus Tag PFL_1447
UniParc UPI000219FF0B
UniProtKB Acc Q4KGQ8
UniProtKB ID Q4KGQ8_PSEF5
UniRef100 UniRef100_Q4KGQ8
UniRef50 UniRef50_P10902
UniRef90 UniRef90_Q4KGQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
L-aspartate oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -12.20
Kyte-Doolittle Hydrophobicity Value -0.166
Molecular Weight (kDa) 59.6
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000735 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1447
Search term: nadB

Human Homologs

Ensembl 110, assembly GRCh38.p14
succinate dehydrogenase complex flavoprotein subunit A [Source:HGNC Symbol;Acc:HGNC:10680]
E-value: 4.6e-59
Percent Identity: 31.2

References

No references are associated with this feature.