Pseudomonas protegens Pf-5, PFL_1457 (dapA_1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1457
Name
dapA_1
Replicon chromosome
Genomic location 1636462 - 1637340 (+ strand)

Cross-References

RefSeq YP_258585.1
GI 70728836
EC Number 4.2.1.52
Entrez 3475747
INSDC AAY90741.1
NCBI Locus Tag PFL_1457
UniParc UPI000054D0F1
UniProtKB Acc Q4KGP8
UniProtKB ID Q4KGP8_PSEF5
UniRef100 UniRef100_Q4KGP8
UniRef50 UniRef50_Q9JZR4
UniRef90 UniRef90_Q4KGP8

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrodipicolinate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -5.68
Kyte-Doolittle Hydrophobicity Value 0.175
Molecular Weight (kDa) 31.1
Isoelectric Point (pI) 5.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000973 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1457
Search term: dapA_1

Human Homologs

References

No references are associated with this feature.