Pseudomonas protegens Pf-5, PFL_1476

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1476
Name
Replicon chromosome
Genomic location 1661370 - 1662503 (- strand)

Cross-References

RefSeq YP_258603.1
GI 70728854
Entrez 3478314
INSDC AAY90759.1
NCBI Locus Tag PFL_1476
UniParc UPI000054D103
UniProtKB Acc Q4KGN0
UniProtKB ID Q4KGN0_PSEF5
UniRef100 UniRef100_Q4KGN0
UniRef50 UniRef50_C5ADR9
UniRef90 UniRef90_Q4KGN0

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -7.98
Kyte-Doolittle Hydrophobicity Value 0.044
Molecular Weight (kDa) 40192.4
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 426 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000982 (368 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1476

Human Homologs

References

No references are associated with this feature.