Pseudomonas protegens Pf-5, PFL_1537

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1537
Name
Replicon chromosome
Genomic location 1725391 - 1726758 (- strand)

Cross-References

RefSeq YP_258664.1
GI 70728915
Entrez 3476703
INSDC AAY90820.1
NCBI Locus Tag PFL_1537
UniParc UPI000054D140
UniProtKB Acc Q4KGG9
UniProtKB ID Q4KGG9_PSEF5
UniRef100 UniRef100_Q4KGG9
UniRef50 UniRef50_I0DWK7
UniRef90 UniRef90_Q4KGG9

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 13.11
Kyte-Doolittle Hydrophobicity Value 0.832
Molecular Weight (kDa) 48385.9
Isoelectric Point (pI) 9.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 528 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001256 (359 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1537

Human Homologs

References

No references are associated with this feature.