Pseudomonas protegens Pf-5, PFL_1564

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1564
Name
Replicon chromosome
Genomic location 1764790 - 1765641 (+ strand)

Cross-References

RefSeq YP_258690.1
GI 70728956
Entrez 3476608
INSDC AAY90861.1
NCBI Locus Tag PFL_1564
UniParc UPI000054D15A
UniProtKB Acc Q4KGE3
UniProtKB ID Q4KGE3_PSEF5
UniRef100 UniRef100_Q4KGE3
UniRef50 UniRef50_C7XAN2
UniRef90 UniRef90_Q886I6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.41
Kyte-Doolittle Hydrophobicity Value -0.212
Molecular Weight (kDa) 31545.0
Isoelectric Point (pI) 7.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 150 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001076 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1564

Human Homologs

References

No references are associated with this feature.