Pseudomonas protegens Pf-5, PFL_1932 (pmpM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1932
Name
pmpM
Replicon chromosome
Genomic location 2154728 - 2156143 (- strand)

Cross-References

RefSeq YP_259051.2
GI 346642848
Entrez 3477623
INSDC AAY91219.2
NCBI Locus Tag PFL_1932
UniParc UPI000219FF4F
UniProtKB Acc Q4KFD2
UniProtKB ID Q4KFD2_PSEF5
UniRef100 UniRef100_Q4KFD2
UniRef50 UniRef50_Q9I3Y3
UniRef90 UniRef90_Q4KFD2

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug resistance protein PmpM
Synonyms
Evidence for Translation
Charge (pH 7) 12.27
Kyte-Doolittle Hydrophobicity Value 0.789
Molecular Weight (kDa) 49824.7
Isoelectric Point (pI) 9.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 464 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001295 (965 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1932
Search term: pmpM

Human Homologs

References

No references are associated with this feature.