Pseudomonas protegens Pf-5, PFL_1982 (prtN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1982
Name
prtN
Replicon chromosome
Genomic location 2212189 - 2212515 (- strand)

Cross-References

RefSeq YP_259101.1
GI 70729364
Entrez 3478338
INSDC AAY91269.1
NCBI Locus Tag PFL_1982
UniParc UPI000054D2F2
UniProtKB Acc Q4KF82
UniProtKB ID Q4KF82_PSEF5
UniRef100 UniRef100_Q4KF82
UniRef50 UniRef50_Q4KF82
UniRef90 UniRef90_Q4KF82

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator prtN
Synonyms
Evidence for Translation
Charge (pH 7) -0.05
Kyte-Doolittle Hydrophobicity Value -0.496
Molecular Weight (kDa) 12259.7
Isoelectric Point (pI) 6.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000593 (335 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1982
Search term: prtN

Human Homologs

References

No references are associated with this feature.